Where Manufacturers Usually Overpay AP – And How to Find It

Manufacturers process huge volumes of invoices across plants, suppliers, and freight providers. Even with a strong ERP, small errors add up to significant, hidden losses in accounts payable (AP)

11/28/20251 min read

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1. Duplicate and erroneous payments

High invoice volume, vendor changes, and manual workarounds make duplicate payments common.

  • Same invoice paid twice under slightly different numbers or dates.​

  • Credit memos not applied, so customers pay full amounts they don’t owe.​

Ways to find them:

  • Run duplicate‑logic tests across invoice number, vendor, amount, and date (not just exact matches).​

  • Reconcile vendor statements to AP ledgers to surface unapplied credits and mismatches.​

2. Freight and logistics overcharges

Freight is a classic leakage area for manufacturers because charges can be complex and spread across many invoices.​

Common issues:

  • Minimum charges or accessorial fees billed outside agreed terms.

  • Fuel surcharges not aligned with contract or market indices.

Ways to find them:

  • Compare freight line items to contracted rate tables and routing guides.​

  • Segment freight by carrier, lane, and plant to spot outliers in cost per unit or per shipment.​

3. Missed rebates and volume discounts

Manufacturers often negotiate rebates, tiered discounts, or marketing funds with key suppliers, but tracking and claiming them is complex.​

Common issues:

  • Not crossing volume thresholds in vendor systems even though actual purchases qualify.

  • Rebate calculations based on incomplete or mis‑coded spend data.

Ways to find them:

  • Rebuild purchase volumes by vendor and category from AP and PO data, then compare against contract tiers.​

  • Reconcile vendor‑reported rebate statements to your own volumes to identify under‑paid amounts.

4. Sales & use tax overpayments

Manufacturers frequently overpay sales & use tax on equipment, repair parts, and plant utilities because exemption rules are complex and vary by state.​

Common issues:

  • Tax charged on exempt manufacturing equipment and components.​

  • Utilities fully taxed even when part of the usage qualifies for production exemptions.​

Ways to find them:

  • Review a sample of high‑value equipment and utility invoices against state rules and exemption certificates.​

  • Commission or perform “utility studies” to split taxable vs exempt usage.​

5. How to start an AP recovery review

Manufacturers don’t need to overhaul everything to start recovering cash.

  • Focus on 3–4 years of AP, freight, and key vendor data from your ERP.​

  • Prioritize a handful of high‑impact tests first: duplicates, unapplied credits, freight anomalies, and obvious tax overpayments.​

A structured recovery audit can often recover 1–3% of audited spend, while also showing exactly which processes and controls to improve